Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851701.1_cds_XP_016511570.1_24297
CDS Infomation

[gene=LOC107828722] [db_xref=GeneID:107828722] [protein=cyclic nucleotide-gated ion channel 1-like] [protein_id=XP_016511570.1] [location=join(2308..2339,2861..3440,3685..3897,4358..4653,4950..5061,5838..6074,6915..7309,8197..8500)] [gbkey=CDS]
Sequence

ATGATGAATCTAACGCAAGATAAATATGTAAGGTTTGAGGACTGGAAGTCAGAACAGTCA
TCCTTCAACTCTGAGCATCAAAATTCTCCAAATAAGAAGCCATTTCATATCAGAAAACCA
TCATTTAGTTTGTTGATGAGTAACATTAGAAGAAGATTTGAGAGTGGTTCTGAAAGAATT
AGTAGTTGGAGAAAATCAATACGCGTCCATCCTCTAACCGATAACCCAACAAAAGATCAA
TCTATCTCGTCAAAGAAACAAATTCTTGATCCTCAGGGTCAATTTGTTCAGCAATGGAAC
AAAATATTTGTATTGATTTGTACAATTGCAGTGTCATTGGATCCACTATTCTTCTACATA
CCTGTCATTGATAACAAAAACAAGTGCCTTGATTTGGACACGACGTTAAAGATCACTGCT
TGCGTTCTACGTTCGATCACTGATCTTTTCTATATCTTTCATATTATCTTGCAATTTCGT
ACTGGCTTTATCGCTCCTTCTTCTCGAGTATTTGGAAGGGGTGAGTTGATTCAAGATTCC
TCTGCTATAGCCAAGAGATATTTGAAATCTTATTTCATTGTTGATGTTTTAGCAGTCCTT
CCACTTCCACAGATTGTGATATTGATTATCAGTCCAAGTGTGAATAGCCCGATTTCTCTG
GCGACGAAAGAAATATTGAAGATTGTCATTTTTGTCCAATATGTTCCAAGAATTTTTAGA
ATTTATCCATTGTATAAAGAAGTAACAAGAACTGCAGGCTTATTTACAGAAACAGCATGG
GGTGGAGCTGCTTTCAACCTTTTCCTCTACATGTTAGCCAGTAATGTAGTCGGAGCCTTC
TGGTATTTGATCTCAGTAGAACGCCAAGATACATGTTGGCGCGACGCATGTAAGAAGATT
GACTCATGTTCTTCAGACTACTTATACTGTGGAGGAAACAGAAACGGAAACGCTTTGCTT
CTAAATTCTTCTTGCCCTCTCCTGAAATCAGAAGATATAAAAGATCCAAATGACTTTGAT
TTTGGTATATTTCTTGATGCTCTTCAGTTTCGGATAGTAGAAAAGCAAAATTTCTGGTCC
AAACTCTTCTATTGCTTTTGGTGGGGGCTGAGAAACTTAAGTTCTCTTGGCCAAAACCTT
AAGACAAGCACATTTGTTGGGGAGATTCTCTTTGCTGTATTCATTTCAATTATTGGGCTA
ATCTTGTTTTCCTTGCTTATTGGCAATATGCAGAAATATTTGCAATCTATCACAGTTAGA
GTAGAAGAGATGAGAGTGAGAAGGCGGGACGCAGAGCAATGGATGTCTCATCGGATGCTT
CCTGATAATCTGAGAGGGCGTATTAGACGACATGAACAATACAAATGGCAAGAAACCAGA
GGTGTTGAAGAAGATTTACTTATTCATAATCTTCCTAGAGATTTGAGAAGAGATTTAAAG
CGCCATCTCTGTTGGTCTTTGGTCAAAAGAGTTCCAATATTCGATAAAATGGATGAACAG
TTACTAGATGCAATGTGTGATCGACTTAAACCAGCACTCTACACAGAGAAGAGTTTCATA
ATCCGAGAAGGCGATCCAGTAGATGAAATGCTCTTTCTAATGAGAGGTACTCTATTAACT
ATGACAACAAATGGTGGAAGAACTGGTTTTTTCAACTCTGTATCACTAAAAGCTGGTGAT
TTCTGTGGAGAGGAGCTTCTTACTTGGGCTTTAGACCCTCATACTTCCTCTAGTCTTCCT
ATTTCAACAAGAACAGTTCAAGCTGAAACTGATATAGAAGCTTTTGCCCTCACTGCTGAT
GATCTCAAGTTTGTTGCCTCACAGTTTCGACGCCTTCATAGCAAACAGCTTCAACATAGT
TTCAGGTTTTACTCACAGCAATGGAGGACATGGGGTGCATGCTTTATACAAGTAGCATGG
CGTCGACATTGTAGGAACAAGCTTGAGAAATCTTTAAGAGAGGAAGAAGATAGATTGCAG
GCTGCGTTAGCAAAAGAGAGCACAAATGCACCAAGTCTTGGAGCTACCATTTATGCATCA
AGATTTGCTGCTAATGCACTACGAGCCTTACGACGCAACCATACAACTGGGGCTAAATTA
TCTCCAACATTACCTCTACTGCTTCAGAAACCAGCTGAACCAAATTTCAGTGAGGAAAAT
CATTCATGA

Peptide Sequence

PEP ID

XP_016511570.1
PEP Infomation

PREDICTED: cyclic nucleotide-gated ion channel 1-like [Nicotiana tabacum]
Sequence

MMNLTQDKYVRFEDWKSEQSSFNSEHQNSPNKKPFHIRKPSFSLLMSNIRRRFESGSERI
SSWRKSIRVHPLTDNPTKDQSISSKKQILDPQGQFVQQWNKIFVLICTIAVSLDPLFFYI
PVIDNKNKCLDLDTTLKITACVLRSITDLFYIFHIILQFRTGFIAPSSRVFGRGELIQDS
SAIAKRYLKSYFIVDVLAVLPLPQIVILIISPSVNSPISLATKEILKIVIFVQYVPRIFR
IYPLYKEVTRTAGLFTETAWGGAAFNLFLYMLASNVVGAFWYLISVERQDTCWRDACKKI
DSCSSDYLYCGGNRNGNALLLNSSCPLLKSEDIKDPNDFDFGIFLDALQFRIVEKQNFWS
KLFYCFWWGLRNLSSLGQNLKTSTFVGEILFAVFISIIGLILFSLLIGNMQKYLQSITVR
VEEMRVRRRDAEQWMSHRMLPDNLRGRIRRHEQYKWQETRGVEEDLLIHNLPRDLRRDLK
RHLCWSLVKRVPIFDKMDEQLLDAMCDRLKPALYTEKSFIIREGDPVDEMLFLMRGTLLT
MTTNGGRTGFFNSVSLKAGDFCGEELLTWALDPHTSSSLPISTRTVQAETDIEAFALTAD
DLKFVASQFRRLHSKQLQHSFRFYSQQWRTWGACFIQVAWRRHCRNKLEKSLREEEDRLQ
AALAKESTNAPSLGATIYASRFAANALRALRRNHTTGAKLSPTLPLLLQKPAEPNFSEEN
HS

Transcript Sequence

Gene sequence data has not been registered.